SRR9993316 - Aedes

Basic Information

Run: SRR9993316

Assay Type: AMPLICON

Biosample: SAMN12595143

Bytes: 24071550

Center Name: NATIONAL TAIWAN UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA560667

Geographic Information

Country: Taiwan

Continent: Asia

Location Name: Taiwan: Taipei

Latitude/Longitude: 25.1298217 N 121.57069 E

Sample Information

Host: Aedes

Isolation: -

Biosample Model: -

Collection Date: 2018-09-30

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

Download
OTU Sequences

FASTA file of OTU sequences

Download
FAPROTAX Report

Functional annotation of Amplicon

Download
VSEARCH Taxon

VSEARCH taxonomic composition classification

Download
QIIME Taxon

QIIME2 taxonomic composition classification

Download

Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR9993316
23.0 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 48
Aerobic_Chemoheterotrophy 46
Nitrogen_Fixation 8
Ureolysis 6
Nonphotosynthetic_Cyanobacteria 4
Dark_Oxidation_Of_Sulfur_Compounds 2
Human_Pathogens_All 2
Human_Associated 2
Animal_Parasites_Or_Symbionts 2
Methanol_Oxidation 1
Methylotrophy 1
Fermentation 1
Intracellular_Parasites 1
Photoheterotrophy 1
Phototrophy 1
Back to Amplicons List
Back to Table