SRR9993032 - Heizmannia

Basic Information

Run: SRR9993032

Assay Type: AMPLICON

Biosample: SAMN12594731

Bytes: 25467842

Center Name: NATIONAL TAIWAN UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA560667

Geographic Information

Country: Taiwan

Continent: Asia

Location Name: Taiwan: Yuanshan

Latitude/Longitude: 24.762085 N 121.5826 E

Sample Information

Host: Heizmannia

Isolation: -

Biosample Model: -

Collection Date: 2018-06-23

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR9993032

24.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 46

Chemoheterotrophy

Aerobic_Chemoheterotrophy 34

Aerobic_Chemoheterotrophy

Fermentation 11

Fermentation

Animal_Parasites_Or_Symbionts 7

Animal_Parasites_Or_Symbionts

Nitrogen_Fixation 3

Nitrogen_Fixation

Human_Associated 3

Human_Associated

Methanogenesis_By_Co2_Reduction_With_H2 2

Methanogenesis_By_Co2_Reduction_With_H2

Hydrogenotrophic_Methanogenesis 2

Hydrogenotrophic_Methanogenesis

Methanogenesis 2

Methanogenesis

Methylotrophy 2

Methylotrophy

Dark_Hydrogen_Oxidation 2

Dark_Hydrogen_Oxidation

Human_Pathogens_All 2

Human_Pathogens_All

Nitrate_Reduction 2

Nitrate_Reduction

Methanotrophy 1

Methanotrophy

Methanogenesis_By_Disproportionation_Of_Methyl_Groups 1

Methanogenesis_By_Disproportionation_Of_Methyl_Groups

Methanol_Oxidation 1

Methanol_Oxidation

Chitinolysis 1

Chitinolysis

Dark_Oxidation_Of_Sulfur_Compounds 1

Dark_Oxidation_Of_Sulfur_Compounds

Human_Gut 1

Human_Gut

Mammal_Gut 1

Mammal_Gut

Aromatic_Compound_Degradation 1

Aromatic_Compound_Degradation

Hydrocarbon_Degradation 1

Hydrocarbon_Degradation

Nitrate_Respiration 1

Nitrate_Respiration

Nitrogen_Respiration 1

Nitrogen_Respiration

Intracellular_Parasites 1

Intracellular_Parasites

Nonphotosynthetic_Cyanobacteria 1

Nonphotosynthetic_Cyanobacteria

Photoheterotrophy 1

Photoheterotrophy

Phototrophy 1

Phototrophy

Plastic_Degradation 1

Plastic_Degradation

Ureolysis 1

Ureolysis

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