SRR9710698 - Salmo salar

Basic Information

Run: SRR9710698

Assay Type: AMPLICON

Biosample: SAMN12314514

Bytes: 57477961

Center Name: NORWEGIAN UNIVERSITY OF LIFE SCIENCES

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA555355

Geographic Information

Country: Norway

Continent: Europe

Location Name: Norway:Inndyr

Latitude/Longitude: 67.08 N 14.06 E

Sample Information

Host: Salmo salar

Isolation: -

Biosample Model: -

Collection Date: 2017-12-05

Host Sex: -

Environmental Information

Broad Scale: marine biome[ENVO:00000447]

Local Scale: animal-associated habitat[ENVO:00006776]

Medium: intestine environment[2100002]

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR9710698
54.8 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

No functional annotation data available

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