SRR9221875 - not applicable

Basic Information

Run: SRR9221875

Assay Type: AMPLICON

Biosample: SAMN11982883

Bytes: 27584485

Center Name: RESEARCH INSTITUTE OF SUBTROPICAL FORESTRY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: SINGLE

Bioproject: PRJNA547964

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: missing

Latitude/Longitude: not collected

Sample Information

Host: not applicable

Isolation: -

Biosample Model: -

Collection Date: 2016-10-30

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

Download
OTU Sequences

FASTA file of OTU sequences

Download
FAPROTAX Report

Functional annotation of Amplicon

Download
VSEARCH Taxon

VSEARCH taxonomic composition classification

Download
QIIME Taxon

QIIME2 taxonomic composition classification

Download

Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR9221875
26.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 31
Fermentation 19
Animal_Parasites_Or_Symbionts 12
Aerobic_Chemoheterotrophy 11
Human_Associated 10
Human_Gut 7
Mammal_Gut 7
Human_Pathogens_All 5
Nitrate_Reduction 4
Xylanolysis 2
Aromatic_Compound_Degradation 2
Nitrate_Respiration 2
Nitrogen_Respiration 2
Intracellular_Parasites 2
Hydrocarbon_Degradation 1
Ureolysis 1
Back to Amplicons List
Back to Table