SRR9221869 - not applicable

Basic Information

Run: SRR9221869

Assay Type: AMPLICON

Biosample: SAMN11982893

Bytes: 24476700

Center Name: RESEARCH INSTITUTE OF SUBTROPICAL FORESTRY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: SINGLE

Bioproject: PRJNA547964

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: missing

Latitude/Longitude: not collected

Sample Information

Host: not applicable

Isolation: -

Biosample Model: -

Collection Date: 2016-10-30

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR9221869

23.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 81

Chemoheterotrophy

Aerobic_Chemoheterotrophy 45

Aerobic_Chemoheterotrophy

Fermentation 31

Fermentation

Aromatic_Compound_Degradation 13

Aromatic_Compound_Degradation

Animal_Parasites_Or_Symbionts 12

Animal_Parasites_Or_Symbionts

Human_Associated 10

Human_Associated

Xylanolysis 7

Xylanolysis

Human_Pathogens_All 6

Human_Pathogens_All

Nitrate_Reduction 6

Nitrate_Reduction

Human_Gut 5

Human_Gut

Mammal_Gut 5

Mammal_Gut

Nitrate_Respiration 4

Nitrate_Respiration

Nitrogen_Respiration 4

Nitrogen_Respiration

Methanol_Oxidation 2

Methanol_Oxidation

Methylotrophy 2

Methylotrophy

Nitrate_Denitrification 2

Nitrate_Denitrification

Nitrite_Denitrification 2

Nitrite_Denitrification

Denitrification 2

Denitrification

Dark_Hydrogen_Oxidation 2

Dark_Hydrogen_Oxidation

Nitrite_Respiration 2

Nitrite_Respiration

Nonphotosynthetic_Cyanobacteria 2

Nonphotosynthetic_Cyanobacteria

Ureolysis 2

Ureolysis

Sulfate_Respiration 1

Sulfate_Respiration

Respiration_Of_Sulfur_Compounds 1

Respiration_Of_Sulfur_Compounds

Chitinolysis 1

Chitinolysis

Cellulolysis 1

Cellulolysis

Human_Pathogens_Nosocomia 1

Human_Pathogens_Nosocomia

Aliphatic_Non_Methane_Hydrocarbon_Degradation 1

Aliphatic_Non_Methane_Hydrocarbon_Degradation

Hydrocarbon_Degradation 1

Hydrocarbon_Degradation

Intracellular_Parasites 1

Intracellular_Parasites

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