SRR9221868 - not applicable

Basic Information

Run: SRR9221868

Assay Type: AMPLICON

Biosample: SAMN11982892

Bytes: 20424543

Center Name: RESEARCH INSTITUTE OF SUBTROPICAL FORESTRY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: SINGLE

Bioproject: PRJNA547964

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: missing

Latitude/Longitude: not collected

Sample Information

Host: not applicable

Isolation: -

Biosample Model: -

Collection Date: 2016-10-30

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

Download

VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR9221868

19.5 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 70

Chemoheterotrophy

Fermentation 40

Fermentation

Aerobic_Chemoheterotrophy 24

Aerobic_Chemoheterotrophy

Human_Associated 12

Human_Associated

Animal_Parasites_Or_Symbionts 12

Animal_Parasites_Or_Symbionts

Human_Gut 9

Human_Gut

Mammal_Gut 9

Mammal_Gut

Nitrate_Reduction 9

Nitrate_Reduction

Xylanolysis 6

Xylanolysis

Methylotrophy 4

Methylotrophy

Aromatic_Compound_Degradation 4

Aromatic_Compound_Degradation

Nitrate_Respiration 4

Nitrate_Respiration

Nitrogen_Respiration 4

Nitrogen_Respiration

Nitrate_Denitrification 3

Nitrate_Denitrification

Nitrite_Denitrification 3

Nitrite_Denitrification

Denitrification 3

Denitrification

Nitrite_Respiration 3

Nitrite_Respiration

Human_Pathogens_All 3

Human_Pathogens_All

Methanotrophy 2

Methanotrophy

Methanol_Oxidation 2

Methanol_Oxidation

Hydrocarbon_Degradation 2

Hydrocarbon_Degradation

Predatory_Or_Exoparasitic 2

Predatory_Or_Exoparasitic

Chitinolysis 1

Chitinolysis

Dark_Hydrogen_Oxidation 1

Dark_Hydrogen_Oxidation

Nitrogen_Fixation 1

Nitrogen_Fixation

Dark_Sulfide_Oxidation 1

Dark_Sulfide_Oxidation

Dark_Sulfur_Oxidation 1

Dark_Sulfur_Oxidation

Dark_Thiosulfate_Oxidation 1

Dark_Thiosulfate_Oxidation

Dark_Oxidation_Of_Sulfur_Compounds 1

Dark_Oxidation_Of_Sulfur_Compounds

Manganese_Oxidation 1

Manganese_Oxidation

Plant_Pathogen 1

Plant_Pathogen

Intracellular_Parasites 1

Intracellular_Parasites

Nonphotosynthetic_Cyanobacteria 1

Nonphotosynthetic_Cyanobacteria

Ureolysis 1

Ureolysis

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