SRR9098378 - not applicable

Basic Information

Run: SRR9098378

Assay Type: AMPLICON

Biosample: SAMN11791866

Bytes: 21794573

Center Name: INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA543947

Geographic Information

Country: China

Continent: Asia

Location Name: China: Beijing

Sample Information

Host: not applicable

Isolation: -

Biosample Model: -

Collection Date: 2006-05-10

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR9098378

20.8 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 37

Chemoheterotrophy

Aerobic_Chemoheterotrophy 25

Aerobic_Chemoheterotrophy

Nitrate_Reduction 13

Nitrate_Reduction

Fermentation 10

Fermentation

Animal_Parasites_Or_Symbionts 7

Animal_Parasites_Or_Symbionts

Nitrate_Respiration 6

Nitrate_Respiration

Nitrogen_Respiration 6

Nitrogen_Respiration

Human_Associated 5

Human_Associated

Human_Pathogens_All 4

Human_Pathogens_All

Nitrate_Denitrification 3

Nitrate_Denitrification

Nitrite_Denitrification 3

Nitrite_Denitrification

Denitrification 3

Denitrification

Nitrite_Respiration 3

Nitrite_Respiration

Xylanolysis 3

Xylanolysis

Aromatic_Compound_Degradation 3

Aromatic_Compound_Degradation

Methanol_Oxidation 2

Methanol_Oxidation

Methylotrophy 2

Methylotrophy

Nitrogen_Fixation 2

Nitrogen_Fixation

Ureolysis 2

Ureolysis

Dark_Hydrogen_Oxidation 1

Dark_Hydrogen_Oxidation

Cellulolysis 1

Cellulolysis

Dark_Sulfide_Oxidation 1

Dark_Sulfide_Oxidation

Dark_Sulfur_Oxidation 1

Dark_Sulfur_Oxidation

Dark_Thiosulfate_Oxidation 1

Dark_Thiosulfate_Oxidation

Dark_Oxidation_Of_Sulfur_Compounds 1

Dark_Oxidation_Of_Sulfur_Compounds

Invertebrate_Parasites 1

Invertebrate_Parasites

Human_Gut 1

Human_Gut

Mammal_Gut 1

Mammal_Gut

Plant_Pathogen 1

Plant_Pathogen

Predatory_Or_Exoparasitic 1

Predatory_Or_Exoparasitic

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