SRR9098352 - not applicable

Basic Information

Run: SRR9098352

Assay Type: AMPLICON

Biosample: SAMN11791859

Bytes: 21586690

Center Name: INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA543947

Quality Control Information

Filter Percentage: 0.0514

QC Average Length: 250

Retained Reads: 151552

Geographic Information

Country: China

Continent: Asia

Location Name: China: Xinjiang, Burqin

Sample Information

Host: not applicable

Isolation: -

Biosample Model: -

Collection Date: 2005-08-25

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

Download
OTU Sequences

FASTA file of OTU sequences

Download
FAPROTAX Report

Functional annotation of Amplicon

Download
VSEARCH Taxon

VSEARCH taxonomic composition classification

Download
QIIME Taxon

QIIME2 taxonomic composition classification

Download

Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR9098352
20.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 10
Nitrate_Reduction 5
Fermentation 4
Aerobic_Chemoheterotrophy 4
Animal_Parasites_Or_Symbionts 4
Human_Pathogens_All 3
Human_Associated 3
Nitrate_Respiration 2
Nitrogen_Respiration 2
Ureolysis 2
Methanol_Oxidation 1
Methylotrophy 1
Sulfate_Respiration 1
Respiration_Of_Sulfur_Compounds 1
Cellulolysis 1
Xylanolysis 1
Plant_Pathogen 1
Aromatic_Compound_Degradation 1
Back to Amplicons List
Back to Table