SRR9098348 - not applicable

Basic Information

Run: SRR9098348

Assay Type: AMPLICON

Biosample: SAMN11791886

Bytes: 21944734

Center Name: INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA543947

Geographic Information

Country: China

Continent: Asia

Location Name: China: Jilin, Dunhua

Sample Information

Host: not applicable

Isolation: -

Biosample Model: -

Collection Date: 2009-05-27

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR9098348

20.9 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 35

Chemoheterotrophy

Aerobic_Chemoheterotrophy 22

Aerobic_Chemoheterotrophy

Fermentation 10

Fermentation

Nitrate_Reduction 10

Nitrate_Reduction

Animal_Parasites_Or_Symbionts 6

Animal_Parasites_Or_Symbionts

Aromatic_Compound_Degradation 4

Aromatic_Compound_Degradation

Nitrate_Respiration 4

Nitrate_Respiration

Nitrogen_Respiration 4

Nitrogen_Respiration

Human_Associated 3

Human_Associated

Methanol_Oxidation 2

Methanol_Oxidation

Methylotrophy 2

Methylotrophy

Nitrogen_Fixation 2

Nitrogen_Fixation

Human_Pathogens_All 2

Human_Pathogens_All

Ureolysis 2

Ureolysis

Sulfate_Respiration 1

Sulfate_Respiration

Respiration_Of_Sulfur_Compounds 1

Respiration_Of_Sulfur_Compounds

Nitrate_Denitrification 1

Nitrate_Denitrification

Nitrite_Denitrification 1

Nitrite_Denitrification

Denitrification 1

Denitrification

Chitinolysis 1

Chitinolysis

Dark_Hydrogen_Oxidation 1

Dark_Hydrogen_Oxidation

Nitrite_Respiration 1

Nitrite_Respiration

Cellulolysis 1

Cellulolysis

Xylanolysis 1

Xylanolysis

Invertebrate_Parasites 1

Invertebrate_Parasites

Human_Gut 1

Human_Gut

Mammal_Gut 1

Mammal_Gut

Hydrocarbon_Degradation 1

Hydrocarbon_Degradation

Iron_Respiration 1

Iron_Respiration

Fumarate_Respiration 1

Fumarate_Respiration

Intracellular_Parasites 1

Intracellular_Parasites

Nonphotosynthetic_Cyanobacteria 1

Nonphotosynthetic_Cyanobacteria

Photosynthetic_Cyanobacteria 1

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 1

Oxygenic_Photoautotrophy

Photoautotrophy 1

Photoautotrophy

Phototrophy 1

Phototrophy

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