SRR9086967 - Rhodnius pallescens

Basic Information

Run: SRR9086967

Assay Type: AMPLICON

Biosample: SAMN11673118

Bytes: 31965381

Center Name: UNIVERSITY OF GEORGIA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA543522

Geographic Information

Country: Panama

Continent: North America

Location Name: Panama: Veraguas

Latitude/Longitude: 8.3098 N 81.0308 W

Sample Information

Host: Rhodnius pallescens

Isolation: -

Biosample Model: -

Collection Date: 2017-07-11

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR9086967

30.5 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 229

Chemoheterotrophy

Aerobic_Chemoheterotrophy 208

Aerobic_Chemoheterotrophy

Aromatic_Compound_Degradation 22

Aromatic_Compound_Degradation

Fermentation 17

Fermentation

Animal_Parasites_Or_Symbionts 15

Animal_Parasites_Or_Symbionts

Human_Associated 12

Human_Associated

Nitrate_Reduction 11

Nitrate_Reduction

Ureolysis 8

Ureolysis

Nitrogen_Fixation 7

Nitrogen_Fixation

Human_Pathogens_All 7

Human_Pathogens_All

Human_Gut 5

Human_Gut

Mammal_Gut 5

Mammal_Gut

Nitrate_Respiration 5

Nitrate_Respiration

Nitrogen_Respiration 5

Nitrogen_Respiration

Methylotrophy 4

Methylotrophy

Methanol_Oxidation 3

Methanol_Oxidation

Human_Pathogens_Nosocomia 3

Human_Pathogens_Nosocomia

Intracellular_Parasites 3

Intracellular_Parasites

Phototrophy 3

Phototrophy

Nitrate_Denitrification 2

Nitrate_Denitrification

Nitrite_Denitrification 2

Nitrite_Denitrification

Denitrification 2

Denitrification

Chitinolysis 2

Chitinolysis

Nitrite_Respiration 2

Nitrite_Respiration

Human_Pathogens_Septicemia 2

Human_Pathogens_Septicemia

Human_Pathogens_Pneumonia 2

Human_Pathogens_Pneumonia

Predatory_Or_Exoparasitic 2

Predatory_Or_Exoparasitic

Photosynthetic_Cyanobacteria 2

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 2

Oxygenic_Photoautotrophy

Photoautotrophy 2

Photoautotrophy

Methanotrophy 1

Methanotrophy

Methanogenesis_By_Co2_Reduction_With_H2 1

Methanogenesis_By_Co2_Reduction_With_H2

Hydrogenotrophic_Methanogenesis 1

Hydrogenotrophic_Methanogenesis

Methanogenesis 1

Methanogenesis

Dark_Hydrogen_Oxidation 1

Dark_Hydrogen_Oxidation

Cellulolysis 1

Cellulolysis

Xylanolysis 1

Xylanolysis

Dark_Oxidation_Of_Sulfur_Compounds 1

Dark_Oxidation_Of_Sulfur_Compounds

Hydrocarbon_Degradation 1

Hydrocarbon_Degradation

Dark_Iron_Oxidation 1

Dark_Iron_Oxidation

Photoheterotrophy 1

Photoheterotrophy

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