SRR9086924 - Rhodnius pallescens

Basic Information

Run: SRR9086924

Assay Type: AMPLICON

Biosample: SAMN11673040

Bytes: 23806496

Center Name: UNIVERSITY OF GEORGIA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA543522

Geographic Information

Country: Panama

Continent: North America

Location Name: Panama: Las Pavas

Latitude/Longitude: 9.0544 N 79.5335 W

Sample Information

Host: Rhodnius pallescens

Isolation: -

Biosample Model: -

Collection Date: 2013-06-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR9086924
22.7 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 52
Aerobic_Chemoheterotrophy 47
Nitrate_Reduction 18
Human_Pathogens_All 15
Human_Associated 15
Animal_Parasites_Or_Symbionts 15
Nitrate_Respiration 15
Nitrogen_Respiration 15
Intracellular_Parasites 11
Aromatic_Compound_Degradation 10
Fermentation 5
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