SRR8893842 - Coptotermes formosanus

Basic Information

Run: SRR8893842

Assay Type: AMPLICON

Biosample: SAMN11397747

Bytes: 15634159

Center Name: INSTITUTE OF APPLIED BIOLOGICAL RESOURCES

Classification: 16S

Sequencing Information

Instrument: Ion S5 XL

Library Layout: SINGLE

Bioproject: PRJNA532793

Geographic Information

Country: China

Continent: Asia

Location Name: China:GuangXi

Latitude/Longitude: missing

Sample Information

Host: Coptotermes formosanus

Isolation: -

Biosample Model: -

Collection Date: 2017-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR8893842
14.9 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Fermentation 11
Chemoheterotrophy 11
Hydrogenotrophic_Methanogenesis 1
Methanogenesis 1
Dark_Hydrogen_Oxidation 1
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