SRR8893838 - Coptotermes formosanus

Basic Information

Run: SRR8893838

Assay Type: AMPLICON

Biosample: SAMN11397751

Bytes: 15358852

Center Name: INSTITUTE OF APPLIED BIOLOGICAL RESOURCES

Classification: 16S

Sequencing Information

Instrument: Ion S5 XL

Library Layout: SINGLE

Bioproject: PRJNA532793

Geographic Information

Country: China

Continent: Asia

Location Name: China:GuangDong

Latitude/Longitude: missing

Sample Information

Host: Coptotermes formosanus

Isolation: -

Biosample Model: -

Collection Date: 2017-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR8893838
14.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 19
Fermentation 18
Methanogenesis_By_Reduction_Of_Methyl_Compounds_With_H2 1
Hydrogenotrophic_Methanogenesis 1
Methanogenesis 1
Methylotrophy 1
Sulfate_Respiration 1
Respiration_Of_Sulfur_Compounds 1
Dark_Hydrogen_Oxidation 1
Aerobic_Chemoheterotrophy 1
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