SRR8815671 - Partamona helleri

Basic Information

Run: SRR8815671

Assay Type: AMPLICON

Biosample: SAMN11288638

Bytes: 6687107

Center Name: UNIVERSIDADE FEDERAL DE VICOSA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA529891

Geographic Information

Country: Brazil

Continent: South America

Location Name: Brazil:Minasgerais,Vicosa

Latitude/Longitude: 20.45 S 42.52 W

Sample Information

Host: Partamona helleri

Isolation: -

Biosample Model: -

Collection Date: 2017-11-25

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR8815671
6.4 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 25
Aerobic_Chemoheterotrophy 21
Fermentation 3
Nitrate_Reduction 2
Chitinolysis 1
Aromatic_Compound_Degradation 1
Nitrate_Respiration 1
Nitrogen_Respiration 1
Predatory_Or_Exoparasitic 1
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