SRR8712530 - Crustacea sp.

Basic Information

Run: SRR8712530

Assay Type: AMPLICON

Biosample: SAMN11104323

Bytes: 22004433

Center Name: INSTITUTE OF SYSTEMATICS AND ECOLOGY OF ANIMALS SB

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA526436

Geographic Information

Country: Russia

Continent: Europe

Location Name: Russia: Lake Teletskoye

Latitude/Longitude: 51.79 N 87.30 E

Sample Information

Host: Crustacea sp.

Isolation: -

Biosample Model: -

Collection Date: 2017-09-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR8712530
21.0 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 42
Aerobic_Chemoheterotrophy 37
Photosynthetic_Cyanobacteria 30
Oxygenic_Photoautotrophy 30
Photoautotrophy 30
Phototrophy 30
Aromatic_Compound_Degradation 11
Nitrate_Reduction 3
Methylotrophy 2
Fermentation 2
Methanotrophy 1
Methanol_Oxidation 1
Hydrocarbon_Degradation 1
Intracellular_Parasites 1
Predatory_Or_Exoparasitic 1
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