SRR8449955 - None

Basic Information

Run: SRR8449955

Assay Type: AMPLICON

Biosample: SAMN10762155

Bytes: 12875412

Center Name: HUAZHONG ARGRICUTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA515577

Geographic Information

Country: China

Continent: Asia

Location Name: China:jiangxi

Latitude/Longitude: 32.13 N 114.08 E

Sample Information

Host: -

Isolation: -

Biosample Model: -

Collection Date: 2018-08-10

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR8449955
12.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 50
Aerobic_Chemoheterotrophy 27
Fermentation 10
Methanol_Oxidation 7
Methylotrophy 7
Ureolysis 7
Human_Associated 4
Animal_Parasites_Or_Symbionts 4
Nitrate_Respiration 4
Nitrate_Reduction 4
Nitrogen_Respiration 4
Aerobic_Ammonia_Oxidation 3
Nitrification 3
Human_Pathogens_All 3
Hydrocarbon_Degradation 3
Intracellular_Parasites 3
Chitinolysis 2
Nitrogen_Fixation 2
Nitrite_Respiration 2
Aromatic_Hydrocarbon_Degradation 2
Aromatic_Compound_Degradation 2
Aliphatic_Non_Methane_Hydrocarbon_Degradation 2
Sulfur_Respiration 1
Thiosulfate_Respiration 1
Respiration_Of_Sulfur_Compounds 1
Arsenate_Respiration 1
Dissimilatory_Arsenate_Reduction 1
Nitrate_Denitrification 1
Nitrite_Denitrification 1
Denitrification 1
Dark_Hydrogen_Oxidation 1
Nitrate_Ammonification 1
Nitrite_Ammonification 1
Dark_Oxidation_Of_Sulfur_Compounds 1
Manganese_Oxidation 1
Human_Gut 1
Mammal_Gut 1
Fumarate_Respiration 1
Nonphotosynthetic_Cyanobacteria 1
Photosynthetic_Cyanobacteria 1
Oxygenic_Photoautotrophy 1
Photoautotrophy 1
Phototrophy 1
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