SRR7758224 - Bactrocera dorsalis

Basic Information

Run: SRR7758224

Assay Type: AMPLICON

Biosample: SAMN09916029

Bytes: 13379026

Center Name: UNIVERSITY OF PATRAS

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA487998

Quality Control Information

Filter Percentage: 0.0

QC Average Length: -

Retained Reads: -

Geographic Information

Country: Bangladesh

Continent: Asia

Location Name: Bangladesh

Latitude/Longitude: 23.952169 N 90.280127 E

Sample Information

Host: Bactrocera dorsalis

Isolation: -

Biosample Model: -

Collection Date: 2013-03-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR7758224
12.8 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Fermentation 103
Chemoheterotrophy 103
Human_Gut 35
Human_Associated 35
Mammal_Gut 35
Animal_Parasites_Or_Symbionts 35
Nitrate_Reduction 28
Aerobic_Chemoheterotrophy 14
Ureolysis 14
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