SRR7758221 - Bactrocera dorsalis

Basic Information

Run: SRR7758221

Assay Type: AMPLICON

Biosample: SAMN09916026

Bytes: 19275126

Center Name: UNIVERSITY OF PATRAS

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA487998

Geographic Information

Country: Bangladesh

Continent: Asia

Location Name: Bangladesh

Latitude/Longitude: 23.952169 N 90.280127 E

Sample Information

Host: Bactrocera dorsalis

Isolation: -

Biosample Model: -

Collection Date: 2013-03-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR7758221
18.4 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Fermentation 96
Chemoheterotrophy 96
Human_Gut 81
Human_Associated 81
Mammal_Gut 81
Animal_Parasites_Or_Symbionts 81
Nitrate_Reduction 56
Aerobic_Chemoheterotrophy 28
Ureolysis 28
Human_Pathogens_All 17
Human_Pathogens_Septicemia 7
Human_Pathogens_Pneumonia 7
Human_Pathogens_Diarrhea 7
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