SRR7704139 - insect

Basic Information

Run: SRR7704139

Assay Type: AMPLICON

Biosample: SAMN09845239

Bytes: 21490623

Center Name: CHINESE ACADEMY OF AGRICULTURAL SCIENCES

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA486401

Geographic Information

Country: China

Continent: Asia

Location Name: China:Huaian

Sample Information

Host: insect

Isolation: -

Biosample Model: -

Collection Date: 2024-03-17

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR7704139
20.5 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 36
Aerobic_Chemoheterotrophy 19
Fermentation 11
Nitrate_Reduction 7
Animal_Parasites_Or_Symbionts 4
Methanol_Oxidation 3
Methylotrophy 3
Human_Associated 3
Ureolysis 3
Human_Pathogens_All 2
Nitrate_Respiration 2
Nitrogen_Respiration 2
Intracellular_Parasites 2
Photosynthetic_Cyanobacteria 2
Oxygenic_Photoautotrophy 2
Photoautotrophy 2
Phototrophy 2
Nitrate_Denitrification 1
Nitrite_Denitrification 1
Denitrification 1
Dark_Hydrogen_Oxidation 1
Nitrogen_Fixation 1
Nitrite_Respiration 1
Invertebrate_Parasites 1
Human_Gut 1
Mammal_Gut 1
Hydrocarbon_Degradation 1
Reductive_Acetogenesis 1
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