SRR7704136 - insect

Basic Information

Run: SRR7704136

Assay Type: AMPLICON

Biosample: SAMN09845240

Bytes: 21464281

Center Name: CHINESE ACADEMY OF AGRICULTURAL SCIENCES

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA486401

Geographic Information

Country: China

Continent: Asia

Location Name: China:Hefei

Sample Information

Host: insect

Isolation: -

Biosample Model: -

Collection Date: 2024-03-17

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

Download
OTU Sequences

FASTA file of OTU sequences

Download
FAPROTAX Report

Functional annotation of Amplicon

Download
VSEARCH Taxon

VSEARCH taxonomic composition classification

Download
QIIME Taxon

QIIME2 taxonomic composition classification

Download

Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR7704136
20.5 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 26
Aerobic_Chemoheterotrophy 13
Fermentation 12
Nitrate_Reduction 6
Animal_Parasites_Or_Symbionts 5
Human_Associated 4
Human_Pathogens_All 3
Xylanolysis 2
Aromatic_Compound_Degradation 2
Hydrocarbon_Degradation 2
Nitrate_Respiration 2
Nitrogen_Respiration 2
Intracellular_Parasites 2
Ureolysis 2
Methanol_Oxidation 1
Methylotrophy 1
Nitrate_Denitrification 1
Nitrite_Denitrification 1
Denitrification 1
Dark_Hydrogen_Oxidation 1
Nitrogen_Fixation 1
Nitrite_Respiration 1
Dark_Sulfide_Oxidation 1
Dark_Sulfur_Oxidation 1
Dark_Thiosulfate_Oxidation 1
Dark_Oxidation_Of_Sulfur_Compounds 1
Manganese_Oxidation 1
Invertebrate_Parasites 1
Human_Gut 1
Mammal_Gut 1
Back to Amplicons List
Back to Table