SRR7226446 - Cavitermes tuberosus

Basic Information

Run: SRR7226446

Assay Type: AMPLICON

Biosample: SAMN08541390

Bytes: 225293661

Center Name: LUXEMBOURG INSTITUTE OF SCIENCE AND TECHNOLOGY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA434183

Geographic Information

Country: French Guiana

Continent: South America

Location Name: French Guiana

Latitude/Longitude: missing

Sample Information

Host: Cavitermes tuberosus

Isolation: -

Biosample Model: -

Collection Date: 2024-01-17

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR7226446
214.9 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 23
Fermentation 16
Reductive_Acetogenesis 7
Aerobic_Chemoheterotrophy 5
Nonphotosynthetic_Cyanobacteria 4
Sulfate_Respiration 1
Respiration_Of_Sulfur_Compounds 1
Nitrogen_Fixation 1
Nitrate_Respiration 1
Nitrate_Reduction 1
Nitrogen_Respiration 1
Intracellular_Parasites 1
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