SRR7110406 - not applicable

Basic Information

Run: SRR7110406

Assay Type: AMPLICON

Biosample: SAMN09062269

Bytes: 22689000

Center Name: KEY LABORATORY OF ENTOMOLOGY AND PEST CONTROL ENGINEERING

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA456853

Geographic Information

Country: China

Continent: Asia

Location Name: China: Guizhou

Latitude/Longitude: 26.35 N 106.417 E

Sample Information

Host: not applicable

Isolation: -

Biosample Model: -

Collection Date: 2024-10-16

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR7110406

21.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 100

Chemoheterotrophy

Fermentation 28

Fermentation

Aerobic_Chemoheterotrophy 27

Aerobic_Chemoheterotrophy

Respiration_Of_Sulfur_Compounds 21

Respiration_Of_Sulfur_Compounds

Sulfate_Respiration 20

Sulfate_Respiration

Nitrate_Reduction 13

Nitrate_Reduction

Methylotrophy 9

Methylotrophy

Human_Associated 7

Human_Associated

Animal_Parasites_Or_Symbionts 7

Animal_Parasites_Or_Symbionts

Methanotrophy 5

Methanotrophy

Dark_Hydrogen_Oxidation 5

Dark_Hydrogen_Oxidation

Hydrocarbon_Degradation 5

Hydrocarbon_Degradation

Nitrate_Respiration 5

Nitrate_Respiration

Nitrogen_Respiration 5

Nitrogen_Respiration

Methanol_Oxidation 4

Methanol_Oxidation

Sulfite_Respiration 4

Sulfite_Respiration

Human_Gut 4

Human_Gut

Mammal_Gut 4

Mammal_Gut

Ureolysis 4

Ureolysis

Human_Pathogens_All 3

Human_Pathogens_All

Iron_Respiration 3

Iron_Respiration

Predatory_Or_Exoparasitic 3

Predatory_Or_Exoparasitic

Knallgas_Bacteria 2

Knallgas_Bacteria

Nitrogen_Fixation 2

Nitrogen_Fixation

Nitrate_Ammonification 2

Nitrate_Ammonification

Nitrite_Ammonification 2

Nitrite_Ammonification

Nitrite_Respiration 2

Nitrite_Respiration

Aromatic_Compound_Degradation 2

Aromatic_Compound_Degradation

Fumarate_Respiration 2

Fumarate_Respiration

Intracellular_Parasites 2

Intracellular_Parasites

Photosynthetic_Cyanobacteria 2

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 2

Oxygenic_Photoautotrophy

Photoautotrophy 2

Photoautotrophy

Phototrophy 2

Phototrophy

Methanogenesis_By_Co2_Reduction_With_H2 1

Methanogenesis_By_Co2_Reduction_With_H2

Hydrogenotrophic_Methanogenesis 1

Hydrogenotrophic_Methanogenesis

Methanogenesis 1

Methanogenesis

Aerobic_Ammonia_Oxidation 1

Aerobic_Ammonia_Oxidation

Nitrification 1

Nitrification

Human_Pathogens_Septicemia 1

Human_Pathogens_Septicemia

Human_Pathogens_Meningitis 1

Human_Pathogens_Meningitis

Dark_Iron_Oxidation 1

Dark_Iron_Oxidation

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