SRR7101122 - Ruspolia differens

Basic Information

Run: SRR7101122

Assay Type: AMPLICON

Biosample: SAMN09010853

Bytes: 95852431

Center Name: KU LEUVEN

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA453689

Geographic Information

Country: Uganda

Continent: Africa

Location Name: Uganda: Masaka

Latitude/Longitude: 0.3267 S 31.7537 E

Sample Information

Host: Ruspolia differens

Isolation: -

Biosample Model: -

Collection Date: 2016-12-01

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR7101122

91.4 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 74

Chemoheterotrophy

Fermentation 37

Fermentation

Aerobic_Chemoheterotrophy 34

Aerobic_Chemoheterotrophy

Aromatic_Compound_Degradation 11

Aromatic_Compound_Degradation

Nitrate_Reduction 10

Nitrate_Reduction

Animal_Parasites_Or_Symbionts 5

Animal_Parasites_Or_Symbionts

Nitrate_Respiration 4

Nitrate_Respiration

Nitrogen_Respiration 4

Nitrogen_Respiration

Ureolysis 4

Ureolysis

Methanol_Oxidation 3

Methanol_Oxidation

Methylotrophy 3

Methylotrophy

Nitrite_Respiration 3

Nitrite_Respiration

Human_Pathogens_All 3

Human_Pathogens_All

Human_Associated 3

Human_Associated

Nitrate_Denitrification 2

Nitrate_Denitrification

Nitrite_Denitrification 2

Nitrite_Denitrification

Denitrification 2

Denitrification

Photoheterotrophy 2

Photoheterotrophy

Phototrophy 2

Phototrophy

Dark_Hydrogen_Oxidation 1

Dark_Hydrogen_Oxidation

Nitrogen_Fixation 1

Nitrogen_Fixation

Nitrate_Ammonification 1

Nitrate_Ammonification

Nitrite_Ammonification 1

Nitrite_Ammonification

Dark_Sulfide_Oxidation 1

Dark_Sulfide_Oxidation

Dark_Sulfur_Oxidation 1

Dark_Sulfur_Oxidation

Dark_Thiosulfate_Oxidation 1

Dark_Thiosulfate_Oxidation

Dark_Oxidation_Of_Sulfur_Compounds 1

Dark_Oxidation_Of_Sulfur_Compounds

Invertebrate_Parasites 1

Invertebrate_Parasites

Predatory_Or_Exoparasitic 1

Predatory_Or_Exoparasitic

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