SRR6737502 - Termite

Basic Information

Run: SRR6737502

Assay Type: AMPLICON

Biosample: SAMN08500802

Bytes: 15210578

Center Name: UNIVERSITY OF GEORGIA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA433530

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: not collected

Latitude/Longitude: not collected

Sample Information

Host: Termite

Isolation: -

Biosample Model: -

Collection Date: 1905-07-09

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR6737502

14.5 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 164

Chemoheterotrophy

Aerobic_Chemoheterotrophy 75

Aerobic_Chemoheterotrophy

Fermentation 48

Fermentation

Respiration_Of_Sulfur_Compounds 13

Respiration_Of_Sulfur_Compounds

Sulfate_Respiration 12

Sulfate_Respiration

Intracellular_Parasites 10

Intracellular_Parasites

Predatory_Or_Exoparasitic 10

Predatory_Or_Exoparasitic

Methanogenesis 7

Methanogenesis

Ureolysis 7

Ureolysis

Hydrogenotrophic_Methanogenesis 6

Hydrogenotrophic_Methanogenesis

Dark_Hydrogen_Oxidation 6

Dark_Hydrogen_Oxidation

Nonphotosynthetic_Cyanobacteria 6

Nonphotosynthetic_Cyanobacteria

Phototrophy 6

Phototrophy

Methylotrophy 5

Methylotrophy

Photosynthetic_Cyanobacteria 5

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 5

Oxygenic_Photoautotrophy

Photoautotrophy 5

Photoautotrophy

Methanol_Oxidation 3

Methanol_Oxidation

Aerobic_Ammonia_Oxidation 3

Aerobic_Ammonia_Oxidation

Nitrification 3

Nitrification

Nitrogen_Fixation 3

Nitrogen_Fixation

Human_Gut 3

Human_Gut

Human_Associated 3

Human_Associated

Mammal_Gut 3

Mammal_Gut

Animal_Parasites_Or_Symbionts 3

Animal_Parasites_Or_Symbionts

Nitrate_Reduction 3

Nitrate_Reduction

Methanogenesis_By_Co2_Reduction_With_H2 2

Methanogenesis_By_Co2_Reduction_With_H2

Methanogenesis_By_Reduction_Of_Methyl_Compounds_With_H2 2

Methanogenesis_By_Reduction_Of_Methyl_Compounds_With_H2

Nitrite_Respiration 2

Nitrite_Respiration

Cellulolysis 2

Cellulolysis

Nitrate_Respiration 2

Nitrate_Respiration

Nitrogen_Respiration 2

Nitrogen_Respiration

Methanogenesis_By_Disproportionation_Of_Methyl_Groups 1

Methanogenesis_By_Disproportionation_Of_Methyl_Groups

Sulfur_Respiration 1

Sulfur_Respiration

Sulfite_Respiration 1

Sulfite_Respiration

Nitrate_Denitrification 1

Nitrate_Denitrification

Nitrite_Denitrification 1

Nitrite_Denitrification

Denitrification 1

Denitrification

Chitinolysis 1

Chitinolysis

Knallgas_Bacteria 1

Knallgas_Bacteria

Nitrate_Ammonification 1

Nitrate_Ammonification

Nitrite_Ammonification 1

Nitrite_Ammonification

Dark_Sulfide_Oxidation 1

Dark_Sulfide_Oxidation

Dark_Sulfur_Oxidation 1

Dark_Sulfur_Oxidation

Dark_Thiosulfate_Oxidation 1

Dark_Thiosulfate_Oxidation

Dark_Oxidation_Of_Sulfur_Compounds 1

Dark_Oxidation_Of_Sulfur_Compounds

Aromatic_Compound_Degradation 1

Aromatic_Compound_Degradation

Iron_Respiration 1

Iron_Respiration

Fumarate_Respiration 1

Fumarate_Respiration

Photoheterotrophy 1

Photoheterotrophy

Plastic_Degradation 1

Plastic_Degradation

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