SRR6737269 - Termite

Basic Information

Run: SRR6737269

Assay Type: AMPLICON

Biosample: SAMN08500861

Bytes: 19799734

Center Name: UNIVERSITY OF GEORGIA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA433530

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: not collected

Latitude/Longitude: not collected

Sample Information

Host: Termite

Isolation: -

Biosample Model: -

Collection Date: 1905-07-09

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR6737269

18.9 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 136

Chemoheterotrophy

Aerobic_Chemoheterotrophy 56

Aerobic_Chemoheterotrophy

Fermentation 49

Fermentation

Sulfate_Respiration 10

Sulfate_Respiration

Respiration_Of_Sulfur_Compounds 10

Respiration_Of_Sulfur_Compounds

Methanogenesis 8

Methanogenesis

Hydrogenotrophic_Methanogenesis 7

Hydrogenotrophic_Methanogenesis

Dark_Hydrogen_Oxidation 5

Dark_Hydrogen_Oxidation

Human_Associated 5

Human_Associated

Animal_Parasites_Or_Symbionts 5

Animal_Parasites_Or_Symbionts

Nonphotosynthetic_Cyanobacteria 5

Nonphotosynthetic_Cyanobacteria

Methylotrophy 4

Methylotrophy

Nitrification 4

Nitrification

Human_Gut 4

Human_Gut

Mammal_Gut 4

Mammal_Gut

Ureolysis 4

Ureolysis

Methanogenesis_By_Co2_Reduction_With_H2 3

Methanogenesis_By_Co2_Reduction_With_H2

Aerobic_Ammonia_Oxidation 3

Aerobic_Ammonia_Oxidation

Aromatic_Compound_Degradation 3

Aromatic_Compound_Degradation

Nitrate_Reduction 3

Nitrate_Reduction

Intracellular_Parasites 3

Intracellular_Parasites

Predatory_Or_Exoparasitic 3

Predatory_Or_Exoparasitic

Methanogenesis_By_Reduction_Of_Methyl_Compounds_With_H2 2

Methanogenesis_By_Reduction_Of_Methyl_Compounds_With_H2

Methanol_Oxidation 2

Methanol_Oxidation

Sulfite_Respiration 2

Sulfite_Respiration

Nitrogen_Fixation 2

Nitrogen_Fixation

Methanogenesis_By_Disproportionation_Of_Methyl_Groups 1

Methanogenesis_By_Disproportionation_Of_Methyl_Groups

Aerobic_Nitrite_Oxidation 1

Aerobic_Nitrite_Oxidation

Thiosulfate_Respiration 1

Thiosulfate_Respiration

Cellulolysis 1

Cellulolysis

Xylanolysis 1

Xylanolysis

Human_Pathogens_All 1

Human_Pathogens_All

Nitrate_Respiration 1

Nitrate_Respiration

Nitrogen_Respiration 1

Nitrogen_Respiration

Photosynthetic_Cyanobacteria 1

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 1

Oxygenic_Photoautotrophy

Photoautotrophy 1

Photoautotrophy

Phototrophy 1

Phototrophy

Plastic_Degradation 1

Plastic_Degradation

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