SRR6473679 - Lasius umbratus
Basic Information
Run: SRR6473679
Assay Type: AMPLICON
Biosample: SAMN08331478
Bytes: 36514122
Center Name: VRIJE UNIVERSITEIT AMSTERDAM
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: PAIRED
Bioproject: PRJNA428829
Geographic Information
Country: USA
Continent: North America
Location Name: USA: Millbrook, NY
Latitude/Longitude: 41.76 N 73.75 W
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR6473679
34.8 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
41
Chemoheterotrophy
Aerobic_Chemoheterotrophy
31
Aerobic_Chemoheterotrophy
Fermentation
8
Fermentation
Aromatic_Compound_Degradation
4
Aromatic_Compound_Degradation
Nitrate_Reduction
4
Nitrate_Reduction
Methylotrophy
3
Methylotrophy
Animal_Parasites_Or_Symbionts
3
Animal_Parasites_Or_Symbionts
Ureolysis
3
Ureolysis
Methanol_Oxidation
2
Methanol_Oxidation
Nitrogen_Fixation
2
Nitrogen_Fixation
Human_Pathogens_All
2
Human_Pathogens_All
Human_Associated
2
Human_Associated
Nitrate_Respiration
2
Nitrate_Respiration
Nitrogen_Respiration
2
Nitrogen_Respiration
Methanotrophy
1
Methanotrophy
Nitrate_Denitrification
1
Nitrate_Denitrification
Nitrite_Denitrification
1
Nitrite_Denitrification
Denitrification
1
Denitrification
Nitrite_Respiration
1
Nitrite_Respiration
Dark_Oxidation_Of_Sulfur_Compounds
1
Dark_Oxidation_Of_Sulfur_Compounds
Hydrocarbon_Degradation
1
Hydrocarbon_Degradation
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