SRR6452734 - Pseudomyrmex gracilis
Basic Information
Run: SRR6452734
Assay Type: AMPLICON
Biosample: SAMN08329505
Bytes: 7102339
Center Name: PRINCETON UNIVERSITY
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: SINGLE
Bioproject: PRJNA429121
Quality Control Information
Filter Percentage: 0.0
QC Average Length: -
Retained Reads: 38711
Geographic Information
Country: USA
Continent: North America
Location Name: USA: Florida, Alachua Co., San Felasco Park
Latitude/Longitude: 29.71 N 82.39 W
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR6452734
6.8 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
37
Chemoheterotrophy
Aerobic_Chemoheterotrophy
20
Aerobic_Chemoheterotrophy
Fermentation
16
Fermentation
Nitrate_Reduction
9
Nitrate_Reduction
Nitrogen_Fixation
4
Nitrogen_Fixation
Animal_Parasites_Or_Symbionts
4
Animal_Parasites_Or_Symbionts
Ureolysis
4
Ureolysis
Human_Associated
3
Human_Associated
Nitrate_Respiration
3
Nitrate_Respiration
Nitrogen_Respiration
3
Nitrogen_Respiration
Methanol_Oxidation
2
Methanol_Oxidation
Methylotrophy
2
Methylotrophy
Dark_Hydrogen_Oxidation
2
Dark_Hydrogen_Oxidation
Nitrite_Respiration
2
Nitrite_Respiration
Human_Pathogens_All
2
Human_Pathogens_All
Human_Gut
2
Human_Gut
Mammal_Gut
2
Mammal_Gut
Aromatic_Compound_Degradation
2
Aromatic_Compound_Degradation
Sulfate_Respiration
1
Sulfate_Respiration
Sulfite_Respiration
1
Sulfite_Respiration
Thiosulfate_Respiration
1
Thiosulfate_Respiration
Respiration_Of_Sulfur_Compounds
1
Respiration_Of_Sulfur_Compounds
Nitrate_Denitrification
1
Nitrate_Denitrification
Nitrite_Denitrification
1
Nitrite_Denitrification
Denitrification
1
Denitrification
Nitrate_Ammonification
1
Nitrate_Ammonification
Nitrite_Ammonification
1
Nitrite_Ammonification
Aromatic_Hydrocarbon_Degradation
1
Aromatic_Hydrocarbon_Degradation
Hydrocarbon_Degradation
1
Hydrocarbon_Degradation
Dark_Iron_Oxidation
1
Dark_Iron_Oxidation
Iron_Respiration
1
Iron_Respiration
Fumarate_Respiration
1
Fumarate_Respiration
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