SRR6452733 - Pseudomyrmex gracilis
Basic Information
Run: SRR6452733
Assay Type: AMPLICON
Biosample: SAMN08329500
Bytes: 3684651
Center Name: PRINCETON UNIVERSITY
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: SINGLE
Bioproject: PRJNA429121
Quality Control Information
Filter Percentage: 0.0
QC Average Length: -
Retained Reads: 19701
Geographic Information
Country: USA
Continent: North America
Location Name: USA: Florida, Alachua Co., San Felasco Park
Latitude/Longitude: 29.71 N 82.39 W
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR6452733
3.5 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
26
Chemoheterotrophy
Aerobic_Chemoheterotrophy
22
Aerobic_Chemoheterotrophy
Aromatic_Compound_Degradation
5
Aromatic_Compound_Degradation
Nitrate_Reduction
5
Nitrate_Reduction
Intracellular_Parasites
5
Intracellular_Parasites
Fermentation
3
Fermentation
Nitrogen_Fixation
2
Nitrogen_Fixation
Thiosulfate_Respiration
1
Thiosulfate_Respiration
Respiration_Of_Sulfur_Compounds
1
Respiration_Of_Sulfur_Compounds
Dark_Oxidation_Of_Sulfur_Compounds
1
Dark_Oxidation_Of_Sulfur_Compounds
Human_Gut
1
Human_Gut
Human_Associated
1
Human_Associated
Mammal_Gut
1
Mammal_Gut
Animal_Parasites_Or_Symbionts
1
Animal_Parasites_Or_Symbionts
Hydrocarbon_Degradation
1
Hydrocarbon_Degradation
Nitrate_Respiration
1
Nitrate_Respiration
Nitrogen_Respiration
1
Nitrogen_Respiration
Photosynthetic_Cyanobacteria
1
Photosynthetic_Cyanobacteria
Oxygenic_Photoautotrophy
1
Oxygenic_Photoautotrophy
Photoautotrophy
1
Photoautotrophy
Phototrophy
1
Phototrophy
Ureolysis
1
Ureolysis
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