SRR6452545 - Pseudomyrmex viduus
Basic Information
Run: SRR6452545
Assay Type: AMPLICON
Biosample: SAMN08329559
Bytes: 6577585
Center Name: PRINCETON UNIVERSITY
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: SINGLE
Bioproject: PRJNA429121
Quality Control Information
Filter Percentage: 0.0
QC Average Length: -
Retained Reads: 35748
Geographic Information
Country: Costa Rica
Continent: North America
Location Name: Costa Rica: Area de Conservacion Guanacaste, River trail
Latitude/Longitude: 10.80 N 85.65 W
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR6452545
6.3 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
24
Chemoheterotrophy
Aerobic_Chemoheterotrophy
16
Aerobic_Chemoheterotrophy
Fermentation
7
Fermentation
Methanol_Oxidation
3
Methanol_Oxidation
Methylotrophy
3
Methylotrophy
Dark_Hydrogen_Oxidation
3
Dark_Hydrogen_Oxidation
Aromatic_Compound_Degradation
3
Aromatic_Compound_Degradation
Nitrate_Reduction
3
Nitrate_Reduction
Nitrate_Denitrification
2
Nitrate_Denitrification
Nitrite_Denitrification
2
Nitrite_Denitrification
Denitrification
2
Denitrification
Nitrite_Respiration
2
Nitrite_Respiration
Nitrate_Respiration
2
Nitrate_Respiration
Nitrogen_Respiration
2
Nitrogen_Respiration
Methanogenesis_By_Co2_Reduction_With_H2
1
Methanogenesis_By_Co2_Reduction_With_H2
Hydrogenotrophic_Methanogenesis
1
Hydrogenotrophic_Methanogenesis
Methanogenesis
1
Methanogenesis
Nitrogen_Fixation
1
Nitrogen_Fixation
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