SRR6452471 - Labidus
Basic Information
Run: SRR6452471
Assay Type: AMPLICON
Biosample: SAMN08329415
Bytes: 4517748
Center Name: PRINCETON UNIVERSITY
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: SINGLE
Bioproject: PRJNA429121
Geographic Information
Country: Costa Rica
Continent: North America
Location Name: Costa Rica: Area de Conservacion Guanacaste, River trail
Latitude/Longitude: 10.80 N 85.65 W
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR6452471
4.3 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
31
Chemoheterotrophy
Aerobic_Chemoheterotrophy
22
Aerobic_Chemoheterotrophy
Fermentation
7
Fermentation
Nitrate_Reduction
5
Nitrate_Reduction
Aromatic_Compound_Degradation
4
Aromatic_Compound_Degradation
Methanol_Oxidation
3
Methanol_Oxidation
Methylotrophy
3
Methylotrophy
Nitrogen_Fixation
2
Nitrogen_Fixation
Manganese_Oxidation
2
Manganese_Oxidation
Nitrate_Respiration
2
Nitrate_Respiration
Nitrogen_Respiration
2
Nitrogen_Respiration
Ureolysis
2
Ureolysis
Nitrate_Denitrification
1
Nitrate_Denitrification
Nitrite_Denitrification
1
Nitrite_Denitrification
Denitrification
1
Denitrification
Dark_Hydrogen_Oxidation
1
Dark_Hydrogen_Oxidation
Nitrite_Respiration
1
Nitrite_Respiration
Human_Pathogens_All
1
Human_Pathogens_All
Human_Associated
1
Human_Associated
Animal_Parasites_Or_Symbionts
1
Animal_Parasites_Or_Symbionts
Aliphatic_Non_Methane_Hydrocarbon_Degradation
1
Aliphatic_Non_Methane_Hydrocarbon_Degradation
Hydrocarbon_Degradation
1
Hydrocarbon_Degradation
Intracellular_Parasites
1
Intracellular_Parasites
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