SRR6452208 - Pseudomyrmex gracilis
Basic Information
Run: SRR6452208
Assay Type: AMPLICON
Biosample: SAMN08329895
Bytes: 9145364
Center Name: PRINCETON UNIVERSITY
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: SINGLE
Bioproject: PRJNA429121
Geographic Information
Country: Costa Rica
Continent: North America
Location Name: Costa Rica: Area de Conservacion Guanacaste, Playa Naranjo
Latitude/Longitude: 10.78 N 85.67 W
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR6452208
8.7 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
65
Chemoheterotrophy
Aerobic_Chemoheterotrophy
59
Aerobic_Chemoheterotrophy
Photoautotrophy
16
Photoautotrophy
Phototrophy
16
Phototrophy
Photosynthetic_Cyanobacteria
11
Photosynthetic_Cyanobacteria
Oxygenic_Photoautotrophy
11
Oxygenic_Photoautotrophy
Ureolysis
10
Ureolysis
Nitrogen_Fixation
6
Nitrogen_Fixation
Aromatic_Compound_Degradation
6
Aromatic_Compound_Degradation
Anoxygenic_Photoautotrophy_S_Oxidizing
5
Anoxygenic_Photoautotrophy_S_Oxidizing
Anoxygenic_Photoautotrophy
5
Anoxygenic_Photoautotrophy
Photoheterotrophy
5
Photoheterotrophy
Methanol_Oxidation
2
Methanol_Oxidation
Methylotrophy
2
Methylotrophy
Manganese_Oxidation
2
Manganese_Oxidation
Fermentation
2
Fermentation
Cellulolysis
1
Cellulolysis
Xylanolysis
1
Xylanolysis
Human_Pathogens_All
1
Human_Pathogens_All
Human_Associated
1
Human_Associated
Animal_Parasites_Or_Symbionts
1
Animal_Parasites_Or_Symbionts
Iron_Respiration
1
Iron_Respiration
Nitrate_Reduction
1
Nitrate_Reduction
Predatory_Or_Exoparasitic
1
Predatory_Or_Exoparasitic
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