SRR6370722 - B. minax

Basic Information

Run: SRR6370722

Assay Type: AMPLICON

Biosample: SAMN08131236

Bytes: 83460609

Center Name: HUAZHONG AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: 454 GS FLX+

Library Layout: SINGLE

Bioproject: PRJNA421059

Geographic Information

Country: China

Continent: Asia

Location Name: China: Yichang

Latitude/Longitude: not applicable

Sample Information

Host: B. minax

Isolation: -

Biosample Model: -

Collection Date: 1905-07-04

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

Download

OTU Sequences

FASTA file of OTU sequences

Download

FAPROTAX Report

Functional annotation of Amplicon

Download

VSEARCH Taxon

VSEARCH taxonomic composition classification

Download

QIIME Taxon

QIIME2 taxonomic composition classification

Download

Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR6370722

79.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 27

Chemoheterotrophy

Fermentation 13

Fermentation

Nitrate_Reduction 13

Nitrate_Reduction

Aerobic_Chemoheterotrophy 12

Aerobic_Chemoheterotrophy

Human_Associated 6

Human_Associated

Animal_Parasites_Or_Symbionts 6

Animal_Parasites_Or_Symbionts

Ureolysis 6

Ureolysis

Human_Pathogens_All 5

Human_Pathogens_All

Nitrate_Respiration 5

Nitrate_Respiration

Nitrogen_Respiration 5

Nitrogen_Respiration

Nitrite_Respiration 4

Nitrite_Respiration

Human_Gut 4

Human_Gut

Mammal_Gut 4

Mammal_Gut

Nitrate_Ammonification 3

Nitrate_Ammonification

Nitrite_Ammonification 3

Nitrite_Ammonification

Methanol_Oxidation 2

Methanol_Oxidation

Methylotrophy 2

Methylotrophy

Plant_Pathogen 2

Plant_Pathogen

Aromatic_Compound_Degradation 2

Aromatic_Compound_Degradation

Plastic_Degradation 2

Plastic_Degradation

Nitrate_Denitrification 1

Nitrate_Denitrification

Nitrite_Denitrification 1

Nitrite_Denitrification

Denitrification 1

Denitrification

Dark_Thiosulfate_Oxidation 1

Dark_Thiosulfate_Oxidation

Dark_Oxidation_Of_Sulfur_Compounds 1

Dark_Oxidation_Of_Sulfur_Compounds

Human_Pathogens_Septicemia 1

Human_Pathogens_Septicemia

Human_Pathogens_Pneumonia 1

Human_Pathogens_Pneumonia

Aromatic_Hydrocarbon_Degradation 1

Aromatic_Hydrocarbon_Degradation

Hydrocarbon_Degradation 1

Hydrocarbon_Degradation

Intracellular_Parasites 1

Intracellular_Parasites

Back to Amplicons List

Back to Table