SRR6078904 - Bactrocera tryoni

Basic Information

Run: SRR6078904

Assay Type: AMPLICON

Biosample: SAMN07701447

Bytes: 1724909513

Center Name: UNIVERSITY OF TECHNOLOGY SYDNEY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA412111

Geographic Information

Country: Australia

Continent: Oceania

Location Name: Australia: New South Wales

Latitude/Longitude: 34.15 S 150.32 E

Sample Information

Host: Bactrocera tryoni

Isolation: -

Biosample Model: -

Collection Date: 2015-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR6078904
1.6 GB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 33
Fermentation 20
Nitrate_Reduction 12
Aerobic_Chemoheterotrophy 11
Human_Associated 6
Animal_Parasites_Or_Symbionts 6
Human_Gut 5
Mammal_Gut 5
Methanol_Oxidation 2
Methylotrophy 2
Ureolysis 2
Human_Pathogens_All 1
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