SRR5786067 - Parasaissetia nigra

Basic Information

Run: SRR5786067

Assay Type: AMPLICON

Biosample: SAMN07291471

Bytes: 50050170

Center Name: UNIVERSITY OF HAIFA

Classification: 18S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA392317

Geographic Information

Country: Israel

Continent: Asia

Location Name: Israel

Latitude/Longitude: 32.43 N 35.07 E

Sample Information

Host: Parasaissetia nigra

Isolation: -

Biosample Model: -

Collection Date: 2015-05-25

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR5786067
47.7 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

No functional annotation data available

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