SRR5682878 - Drosophila melanogaster

Basic Information

Run: SRR5682878

Assay Type: AMPLICON

Biosample: SAMN07194322

Bytes: 1783237

Center Name: UNIVERSITY OF SYDNEY

Classification: 16S

Sequencing Information

Instrument: 454 GS FLX Titanium

Library Layout: SINGLE

Bioproject: PRJNA389291

Geographic Information

Country: Australia

Continent: Oceania

Location Name: Australia: Sydney

Sample Information

Host: Drosophila melanogaster

Isolation: -

Biosample Model: -

Collection Date: -

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR5682878
1.7 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 26
Aerobic_Chemoheterotrophy 17
Fermentation 9
Nitrate_Reduction 4
Aerobic_Anoxygenic_Phototrophy 4
Photoheterotrophy 4
Phototrophy 4
Ureolysis 4
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