SRR5575838 - Pachycereus pringlei
Basic Information
Run: SRR5575838
Assay Type: AMPLICON
Biosample: SAMN06883951
Bytes: 9881557
Center Name: UNIVERSITY OF MARYLAND
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: SINGLE
Bioproject: PRJNA385203
Geographic Information
Country: Mexico
Continent: North America
Location Name: Mexico: SON,Bahia de Kino
Latitude/Longitude: 28.49516 N 111.48036 W
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR5575838
9.4 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
81
Chemoheterotrophy
Aerobic_Chemoheterotrophy
41
Aerobic_Chemoheterotrophy
Methanol_Oxidation
21
Methanol_Oxidation
Methylotrophy
21
Methylotrophy
Nitrate_Reduction
18
Nitrate_Reduction
Nitrate_Respiration
17
Nitrate_Respiration
Nitrogen_Respiration
17
Nitrogen_Respiration
Human_Pathogens_All
13
Human_Pathogens_All
Human_Associated
13
Human_Associated
Animal_Parasites_Or_Symbionts
13
Animal_Parasites_Or_Symbionts
Aliphatic_Non_Methane_Hydrocarbon_Degradation
6
Aliphatic_Non_Methane_Hydrocarbon_Degradation
Hydrocarbon_Degradation
6
Hydrocarbon_Degradation
Fermentation
5
Fermentation
Dark_Hydrogen_Oxidation
4
Dark_Hydrogen_Oxidation
Reductive_Acetogenesis
4
Reductive_Acetogenesis
Aromatic_Compound_Degradation
2
Aromatic_Compound_Degradation
Photoheterotrophy
2
Photoheterotrophy
Phototrophy
2
Phototrophy
Ureolysis
1
Ureolysis
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