SRR5575835 - Pachycereus pringlei
Basic Information
Run: SRR5575835
Assay Type: AMPLICON
Biosample: SAMN06883958
Bytes: 57009652
Center Name: UNIVERSITY OF MARYLAND
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: SINGLE
Bioproject: PRJNA385203
Geographic Information
Country: Mexico
Continent: North America
Location Name: Mexico: SON,Bahia de Kino
Latitude/Longitude: 28.50216 N 111.47418 W
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR5575835
54.4 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
84
Chemoheterotrophy
Aerobic_Chemoheterotrophy
63
Aerobic_Chemoheterotrophy
Fermentation
17
Fermentation
Human_Associated
3
Human_Associated
Animal_Parasites_Or_Symbionts
3
Animal_Parasites_Or_Symbionts
Nitrogen_Fixation
2
Nitrogen_Fixation
Human_Pathogens_All
2
Human_Pathogens_All
Aliphatic_Non_Methane_Hydrocarbon_Degradation
2
Aliphatic_Non_Methane_Hydrocarbon_Degradation
Hydrocarbon_Degradation
2
Hydrocarbon_Degradation
Nitrate_Respiration
2
Nitrate_Respiration
Nitrate_Reduction
2
Nitrate_Reduction
Nitrogen_Respiration
2
Nitrogen_Respiration
Ureolysis
2
Ureolysis
Human_Gut
1
Human_Gut
Mammal_Gut
1
Mammal_Gut
Aromatic_Compound_Degradation
1
Aromatic_Compound_Degradation
Iron_Respiration
1
Iron_Respiration
Predatory_Or_Exoparasitic
1
Predatory_Or_Exoparasitic
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