SRR27445281 - not applicable

Basic Information

Run: SRR27445281

Assay Type: AMPLICON

Biosample: SAMN39275620

Bytes: 14096133

Center Name: NINGBO UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina NovaSeq 6000

Library Layout: PAIRED

Bioproject: PRJNA1061644

Geographic Information

Country: China

Continent: Asia

Location Name: China: Fuyang

Latitude/Longitude: 32.91 N 115.86 E

Sample Information

Host: not applicable

Isolation: -

Biosample Model: -

Collection Date: 2020-10-10

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR27445281

13.4 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 84

Chemoheterotrophy

Aerobic_Chemoheterotrophy 69

Aerobic_Chemoheterotrophy

Nitrate_Reduction 11

Nitrate_Reduction

Predatory_Or_Exoparasitic 10

Predatory_Or_Exoparasitic

Fermentation 8

Fermentation

Nitrate_Respiration 8

Nitrate_Respiration

Nitrogen_Respiration 8

Nitrogen_Respiration

Nitrate_Denitrification 4

Nitrate_Denitrification

Nitrite_Denitrification 4

Nitrite_Denitrification

Denitrification 4

Denitrification

Nitrite_Respiration 4

Nitrite_Respiration

Dark_Sulfide_Oxidation 4

Dark_Sulfide_Oxidation

Dark_Sulfur_Oxidation 4

Dark_Sulfur_Oxidation

Dark_Thiosulfate_Oxidation 4

Dark_Thiosulfate_Oxidation

Dark_Oxidation_Of_Sulfur_Compounds 4

Dark_Oxidation_Of_Sulfur_Compounds

Ureolysis 4

Ureolysis

Nitrogen_Fixation 3

Nitrogen_Fixation

Human_Pathogens_All 3

Human_Pathogens_All

Human_Associated 3

Human_Associated

Animal_Parasites_Or_Symbionts 3

Animal_Parasites_Or_Symbionts

Methanol_Oxidation 2

Methanol_Oxidation

Methylotrophy 2

Methylotrophy

Chitinolysis 2

Chitinolysis

Xylanolysis 2

Xylanolysis

Arsenate_Detoxification 1

Arsenate_Detoxification

Dissimilatory_Arsenate_Reduction 1

Dissimilatory_Arsenate_Reduction

Cellulolysis 1

Cellulolysis

Manganese_Oxidation 1

Manganese_Oxidation

Aromatic_Compound_Degradation 1

Aromatic_Compound_Degradation

Plastic_Degradation 1

Plastic_Degradation

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