SRR27445234 - not applicable

Basic Information

Run: SRR27445234

Assay Type: AMPLICON

Biosample: SAMN39275626

Bytes: 14342416

Center Name: NINGBO UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina NovaSeq 6000

Library Layout: PAIRED

Bioproject: PRJNA1061644

Geographic Information

Country: China

Continent: Asia

Location Name: China: Hefei

Latitude/Longitude: 31.79 N 117.31 E

Sample Information

Host: not applicable

Isolation: -

Biosample Model: -

Collection Date: 2020-08-14

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR27445234

13.7 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 95

Chemoheterotrophy

Fermentation 48

Fermentation

Aerobic_Chemoheterotrophy 45

Aerobic_Chemoheterotrophy

Animal_Parasites_Or_Symbionts 18

Animal_Parasites_Or_Symbionts

Human_Associated 15

Human_Associated

Human_Gut 13

Human_Gut

Mammal_Gut 13

Mammal_Gut

Nitrate_Reduction 8

Nitrate_Reduction

Xylanolysis 4

Xylanolysis

Predatory_Or_Exoparasitic 4

Predatory_Or_Exoparasitic

Human_Pathogens_All 3

Human_Pathogens_All

Nitrate_Respiration 3

Nitrate_Respiration

Nitrogen_Respiration 3

Nitrogen_Respiration

Methanol_Oxidation 2

Methanol_Oxidation

Methylotrophy 2

Methylotrophy

Aromatic_Compound_Degradation 2

Aromatic_Compound_Degradation

Aerobic_Ammonia_Oxidation 1

Aerobic_Ammonia_Oxidation

Nitrification 1

Nitrification

Nitrate_Denitrification 1

Nitrate_Denitrification

Nitrite_Denitrification 1

Nitrite_Denitrification

Denitrification 1

Denitrification

Chitinolysis 1

Chitinolysis

Nitrite_Respiration 1

Nitrite_Respiration

Human_Pathogens_Diarrhea 1

Human_Pathogens_Diarrhea

Anoxygenic_Photoautotrophy_S_Oxidizing 1

Anoxygenic_Photoautotrophy_S_Oxidizing

Anoxygenic_Photoautotrophy 1

Anoxygenic_Photoautotrophy

Photoautotrophy 1

Photoautotrophy

Photoheterotrophy 1

Photoheterotrophy

Phototrophy 1

Phototrophy

Ureolysis 1

Ureolysis

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