SRR26832940 - Arma custos

Basic Information

Run: SRR26832940

Assay Type: AMPLICON

Biosample: SAMN38196685

Bytes: 439998041

Center Name: CHINA AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina NovaSeq 6000

Library Layout: PAIRED

Bioproject: PRJNA1036837

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: not applicable

Latitude/Longitude: missing

Sample Information

Host: Arma custos

Isolation: -

Biosample Model: -

Collection Date: -

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR26832940
419.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 110
Aerobic_Chemoheterotrophy 84
Nitrate_Reduction 25
Aromatic_Compound_Degradation 18
Fermentation 16
Animal_Parasites_Or_Symbionts 16
Human_Associated 14
Nitrate_Respiration 13
Nitrogen_Respiration 13
Ureolysis 12
Human_Pathogens_All 10
Methanol_Oxidation 9
Methylotrophy 9
Chitinolysis 5
Nitrate_Denitrification 4
Nitrite_Denitrification 4
Denitrification 4
Dark_Hydrogen_Oxidation 4
Nitrite_Respiration 4
Human_Gut 4
Mammal_Gut 4
Dark_Oxidation_Of_Sulfur_Compounds 3
Nitrogen_Fixation 2
Nonphotosynthetic_Cyanobacteria 2
Cellulolysis 1
Xylanolysis 1
Plant_Pathogen 1
Intracellular_Parasites 1
Predatory_Or_Exoparasitic 1
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