SRR26832933 - Eocanthecona furcellata

Basic Information

Run: SRR26832933

Assay Type: AMPLICON

Biosample: SAMN38196709

Bytes: 366295697

Center Name: CHINA AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina NovaSeq 6000

Library Layout: PAIRED

Bioproject: PRJNA1036837

Quality Control Information

Filter Percentage: 1.0

QC Average Length: -

Retained Reads: 0

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: not applicable

Latitude/Longitude: missing

Sample Information

Host: Eocanthecona furcellata

Isolation: -

Biosample Model: -

Collection Date: -

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR26832933

349.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 101

Chemoheterotrophy

Aerobic_Chemoheterotrophy 79

Aerobic_Chemoheterotrophy

Nitrate_Reduction 18

Nitrate_Reduction

Methanol_Oxidation 15

Methanol_Oxidation

Methylotrophy 15

Methylotrophy

Aromatic_Compound_Degradation 15

Aromatic_Compound_Degradation

Ureolysis 14

Ureolysis

Animal_Parasites_Or_Symbionts 12

Animal_Parasites_Or_Symbionts

Human_Associated 11

Human_Associated

Nitrate_Respiration 11

Nitrate_Respiration

Nitrogen_Respiration 11

Nitrogen_Respiration

Human_Pathogens_All 9

Human_Pathogens_All

Fermentation 5

Fermentation

Nitrate_Denitrification 4

Nitrate_Denitrification

Nitrite_Denitrification 4

Nitrite_Denitrification

Denitrification 4

Denitrification

Chitinolysis 4

Chitinolysis

Nitrite_Respiration 4

Nitrite_Respiration

Dark_Hydrogen_Oxidation 3

Dark_Hydrogen_Oxidation

Nitrogen_Fixation 2

Nitrogen_Fixation

Human_Gut 2

Human_Gut

Mammal_Gut 2

Mammal_Gut

Intracellular_Parasites 2

Intracellular_Parasites

Cellulolysis 1

Cellulolysis

Xylanolysis 1

Xylanolysis

Dark_Oxidation_Of_Sulfur_Compounds 1

Dark_Oxidation_Of_Sulfur_Compounds

Human_Pathogens_Nosocomia 1

Human_Pathogens_Nosocomia

Aliphatic_Non_Methane_Hydrocarbon_Degradation 1

Aliphatic_Non_Methane_Hydrocarbon_Degradation

Hydrocarbon_Degradation 1

Hydrocarbon_Degradation

Predatory_Or_Exoparasitic 1

Predatory_Or_Exoparasitic

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