SRR26832929 - Arma custos

Basic Information

Run: SRR26832929

Assay Type: AMPLICON

Biosample: SAMN38196686

Bytes: 421702001

Center Name: CHINA AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina NovaSeq 6000

Library Layout: PAIRED

Bioproject: PRJNA1036837

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: not applicable

Latitude/Longitude: missing

Sample Information

Host: Arma custos

Isolation: -

Biosample Model: -

Collection Date: -

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR26832929
402.2 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 105
Aerobic_Chemoheterotrophy 71
Fermentation 28
Animal_Parasites_Or_Symbionts 26
Nitrate_Reduction 24
Human_Associated 23
Human_Pathogens_All 19
Nitrate_Respiration 17
Nitrogen_Respiration 17
Aromatic_Compound_Degradation 9
Methanol_Oxidation 8
Methylotrophy 8
Human_Gut 5
Mammal_Gut 5
Ureolysis 5
Nitrate_Denitrification 4
Nitrite_Denitrification 4
Denitrification 4
Dark_Hydrogen_Oxidation 4
Nitrite_Respiration 4
Xylanolysis 2
Hydrocarbon_Degradation 2
Chitinolysis 1
Nitrogen_Fixation 1
Cellulolysis 1
Human_Pathogens_Nosocomia 1
Human_Pathogens_Diarrhea 1
Plant_Pathogen 1
Intracellular_Parasites 1
Predatory_Or_Exoparasitic 1
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