SRR26832925 - Sycanus bifidus

Basic Information

Run: SRR26832925

Assay Type: AMPLICON

Biosample: SAMN38196716

Bytes: 301538355

Center Name: CHINA AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina NovaSeq 6000

Library Layout: PAIRED

Bioproject: PRJNA1036837

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: not applicable

Latitude/Longitude: missing

Sample Information

Host: Sycanus bifidus

Isolation: -

Biosample Model: -

Collection Date: -

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR26832925

287.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 234

Chemoheterotrophy

Aerobic_Chemoheterotrophy 175

Aerobic_Chemoheterotrophy

Nitrate_Reduction 33

Nitrate_Reduction

Fermentation 29

Fermentation

Ureolysis 29

Ureolysis

Methanol_Oxidation 28

Methanol_Oxidation

Methylotrophy 28

Methylotrophy

Animal_Parasites_Or_Symbionts 22

Animal_Parasites_Or_Symbionts

Human_Associated 21

Human_Associated

Nitrate_Respiration 20

Nitrate_Respiration

Nitrogen_Respiration 20

Nitrogen_Respiration

Human_Pathogens_All 18

Human_Pathogens_All

Aromatic_Compound_Degradation 17

Aromatic_Compound_Degradation

Nitrogen_Fixation 7

Nitrogen_Fixation

Nitrate_Denitrification 6

Nitrate_Denitrification

Nitrite_Denitrification 6

Nitrite_Denitrification

Denitrification 6

Denitrification

Nitrite_Respiration 6

Nitrite_Respiration

Intracellular_Parasites 6

Intracellular_Parasites

Dark_Hydrogen_Oxidation 5

Dark_Hydrogen_Oxidation

Hydrocarbon_Degradation 5

Hydrocarbon_Degradation

Dark_Oxidation_Of_Sulfur_Compounds 4

Dark_Oxidation_Of_Sulfur_Compounds

Predatory_Or_Exoparasitic 4

Predatory_Or_Exoparasitic

Human_Gut 3

Human_Gut

Mammal_Gut 3

Mammal_Gut

Aliphatic_Non_Methane_Hydrocarbon_Degradation 3

Aliphatic_Non_Methane_Hydrocarbon_Degradation

Photosynthetic_Cyanobacteria 3

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 3

Oxygenic_Photoautotrophy

Photoautotrophy 3

Photoautotrophy

Phototrophy 3

Phototrophy

Chitinolysis 2

Chitinolysis

Manganese_Oxidation 2

Manganese_Oxidation

Human_Pathogens_Nosocomia 2

Human_Pathogens_Nosocomia

Sulfur_Respiration 1

Sulfur_Respiration

Respiration_Of_Sulfur_Compounds 1

Respiration_Of_Sulfur_Compounds

Dark_Sulfide_Oxidation 1

Dark_Sulfide_Oxidation

Dark_Sulfur_Oxidation 1

Dark_Sulfur_Oxidation

Dark_Thiosulfate_Oxidation 1

Dark_Thiosulfate_Oxidation

Aromatic_Hydrocarbon_Degradation 1

Aromatic_Hydrocarbon_Degradation

Reductive_Acetogenesis 1

Reductive_Acetogenesis

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