SRR26533656 - Solanum lycopersicum
Basic Information
Run: SRR26533656
Assay Type: AMPLICON
Biosample: SAMN37992506
Bytes: 14735827
Center Name: UNIVERSITY OF HELSINKI
Classification: 16S
Sequencing Information
Instrument: Illumina NovaSeq 6000
Library Layout: PAIRED
Bioproject: PRJNA1032433
Geographic Information
Country: Nigeria
Continent: Africa
Location Name: Nigeria: Ibadan
Latitude/Longitude: 7.4200100 N 3.97283300 E
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR26533656
14.1 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
33
Chemoheterotrophy
Aerobic_Chemoheterotrophy
28
Aerobic_Chemoheterotrophy
Nitrate_Reduction
6
Nitrate_Reduction
Ureolysis
5
Ureolysis
Methanol_Oxidation
4
Methanol_Oxidation
Methylotrophy
4
Methylotrophy
Fermentation
4
Fermentation
Animal_Parasites_Or_Symbionts
3
Animal_Parasites_Or_Symbionts
Aromatic_Compound_Degradation
3
Aromatic_Compound_Degradation
Nitrate_Respiration
3
Nitrate_Respiration
Nitrogen_Respiration
3
Nitrogen_Respiration
Nitrate_Denitrification
2
Nitrate_Denitrification
Nitrite_Denitrification
2
Nitrite_Denitrification
Denitrification
2
Denitrification
Dark_Hydrogen_Oxidation
2
Dark_Hydrogen_Oxidation
Nitrite_Respiration
2
Nitrite_Respiration
Human_Gut
2
Human_Gut
Human_Associated
2
Human_Associated
Mammal_Gut
2
Mammal_Gut
Predatory_Or_Exoparasitic
2
Predatory_Or_Exoparasitic
Nitrogen_Fixation
1
Nitrogen_Fixation
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