SRR26533619 - Solanum lycopersicum
Basic Information
Run: SRR26533619
Assay Type: AMPLICON
Biosample: SAMN37992505
Bytes: 6651430
Center Name: UNIVERSITY OF HELSINKI
Classification: 16S
Sequencing Information
Instrument: Illumina NovaSeq 6000
Library Layout: PAIRED
Bioproject: PRJNA1032433
Geographic Information
Country: Nigeria
Continent: Africa
Location Name: Nigeria: Ilorin
Latitude/Longitude: 8.43996800 N 4.52450400 E
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR26533619
6.3 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
18
Chemoheterotrophy
Aerobic_Chemoheterotrophy
15
Aerobic_Chemoheterotrophy
Human_Associated
5
Human_Associated
Animal_Parasites_Or_Symbionts
5
Animal_Parasites_Or_Symbionts
Human_Pathogens_All
4
Human_Pathogens_All
Fermentation
3
Fermentation
Ureolysis
3
Ureolysis
Nitrate_Reduction
2
Nitrate_Reduction
Methanol_Oxidation
1
Methanol_Oxidation
Methylotrophy
1
Methylotrophy
Nitrate_Denitrification
1
Nitrate_Denitrification
Nitrite_Denitrification
1
Nitrite_Denitrification
Denitrification
1
Denitrification
Dark_Hydrogen_Oxidation
1
Dark_Hydrogen_Oxidation
Nitrite_Respiration
1
Nitrite_Respiration
Human_Gut
1
Human_Gut
Mammal_Gut
1
Mammal_Gut
Aromatic_Compound_Degradation
1
Aromatic_Compound_Degradation
Nitrate_Respiration
1
Nitrate_Respiration
Nitrogen_Respiration
1
Nitrogen_Respiration
Plastic_Degradation
1
Plastic_Degradation
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