SRR26315561 - Nilaparvata lugens

Basic Information

Run: SRR26315561

Assay Type: AMPLICON

Biosample: SAMN37714203

Bytes: 2624359

Center Name: WUHAN UNIVERSITY

Classification: ITS

Sequencing Information

Instrument: Sequel II

Library Layout: SINGLE

Bioproject: PRJNA1025130

Geographic Information

Country: China

Continent: Asia

Location Name: China: Wuhan

Latitude/Longitude: missing

Sample Information

Host: Nilaparvata lugens

Isolation: -

Biosample Model: -

Collection Date: 2024-08-22

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR26315561
2.5 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Aerobic_Chemoheterotrophy 3
Chemoheterotrophy 3
Nitrate_Respiration 2
Nitrate_Reduction 2
Nitrogen_Respiration 2
Fermentation 1
Human_Gut 1
Human_Associated 1
Mammal_Gut 1
Animal_Parasites_Or_Symbionts 1
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