SRR25774178 - Harmonia axyridis

Basic Information

Run: SRR25774178

Assay Type: AMPLICON

Biosample: SAMN37176920

Bytes: 15971746

Center Name: NANJING AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA1009990

Geographic Information

Country: China

Continent: Asia

Location Name: China:Nanjing

Latitude/Longitude: 31.14 N 118.131 E

Sample Information

Host: Harmonia axyridis

Isolation: -

Biosample Model: -

Collection Date: 2021-07-15

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR25774178

15.2 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 37

Chemoheterotrophy

Aerobic_Chemoheterotrophy 26

Aerobic_Chemoheterotrophy

Fermentation 7

Fermentation

Aromatic_Compound_Degradation 6

Aromatic_Compound_Degradation

Nitrate_Reduction 6

Nitrate_Reduction

Methanol_Oxidation 4

Methanol_Oxidation

Methylotrophy 4

Methylotrophy

Ureolysis 4

Ureolysis

Nitrate_Denitrification 2

Nitrate_Denitrification

Nitrite_Denitrification 2

Nitrite_Denitrification

Denitrification 2

Denitrification

Nitrite_Respiration 2

Nitrite_Respiration

Human_Gut 2

Human_Gut

Human_Associated 2

Human_Associated

Mammal_Gut 2

Mammal_Gut

Animal_Parasites_Or_Symbionts 2

Animal_Parasites_Or_Symbionts

Nitrate_Respiration 2

Nitrate_Respiration

Nitrogen_Respiration 2

Nitrogen_Respiration

Predatory_Or_Exoparasitic 2

Predatory_Or_Exoparasitic

Sulfate_Respiration 1

Sulfate_Respiration

Respiration_Of_Sulfur_Compounds 1

Respiration_Of_Sulfur_Compounds

Chitinolysis 1

Chitinolysis

Dark_Hydrogen_Oxidation 1

Dark_Hydrogen_Oxidation

Cellulolysis 1

Cellulolysis

Xylanolysis 1

Xylanolysis

Dark_Sulfide_Oxidation 1

Dark_Sulfide_Oxidation

Dark_Sulfur_Oxidation 1

Dark_Sulfur_Oxidation

Dark_Thiosulfate_Oxidation 1

Dark_Thiosulfate_Oxidation

Dark_Oxidation_Of_Sulfur_Compounds 1

Dark_Oxidation_Of_Sulfur_Compounds

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