SRR25457029 - Harmonia axyridis

Basic Information

Run: SRR25457029

Assay Type: AMPLICON

Biosample: SAMN36759182

Bytes: 12402939

Center Name: GANSU AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA1000108

Geographic Information

Country: China

Continent: Asia

Location Name: China: Gansu

Sample Information

Host: Harmonia axyridis

Isolation: -

Biosample Model: -

Collection Date: 2023-04-06

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR25457029

11.8 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 63

Chemoheterotrophy

Fermentation 33

Fermentation

Aerobic_Chemoheterotrophy 30

Aerobic_Chemoheterotrophy

Nitrate_Reduction 18

Nitrate_Reduction

Nitrate_Respiration 15

Nitrate_Respiration

Nitrogen_Respiration 15

Nitrogen_Respiration

Nitrite_Respiration 10

Nitrite_Respiration

Nitrate_Denitrification 9

Nitrate_Denitrification

Nitrite_Denitrification 9

Nitrite_Denitrification

Denitrification 9

Denitrification

Human_Associated 9

Human_Associated

Animal_Parasites_Or_Symbionts 9

Animal_Parasites_Or_Symbionts

Dark_Hydrogen_Oxidation 8

Dark_Hydrogen_Oxidation

Respiration_Of_Sulfur_Compounds 7

Respiration_Of_Sulfur_Compounds

Human_Gut 6

Human_Gut

Mammal_Gut 6

Mammal_Gut

Methanol_Oxidation 5

Methanol_Oxidation

Methylotrophy 5

Methylotrophy

Human_Pathogens_All 5

Human_Pathogens_All

Sulfur_Respiration 4

Sulfur_Respiration

Sulfate_Respiration 3

Sulfate_Respiration

Thiosulfate_Respiration 3

Thiosulfate_Respiration

Nitrogen_Fixation 3

Nitrogen_Fixation

Dark_Sulfide_Oxidation 3

Dark_Sulfide_Oxidation

Dark_Oxidation_Of_Sulfur_Compounds 3

Dark_Oxidation_Of_Sulfur_Compounds

Iron_Respiration 3

Iron_Respiration

Fumarate_Respiration 3

Fumarate_Respiration

Dark_Thiosulfate_Oxidation 2

Dark_Thiosulfate_Oxidation

Manganese_Respiration 2

Manganese_Respiration

Aromatic_Compound_Degradation 2

Aromatic_Compound_Degradation

Sulfite_Respiration 1

Sulfite_Respiration

Nitrate_Ammonification 1

Nitrate_Ammonification

Nitrite_Ammonification 1

Nitrite_Ammonification

Dark_Sulfur_Oxidation 1

Dark_Sulfur_Oxidation

Predatory_Or_Exoparasitic 1

Predatory_Or_Exoparasitic

Ureolysis 1

Ureolysis

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