SRR25457013 - Harmonia axyridis

Basic Information

Run: SRR25457013

Assay Type: AMPLICON

Biosample: SAMN36759187

Bytes: 12337006

Center Name: GANSU AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA1000108

Geographic Information

Country: China

Continent: Asia

Location Name: China: Gansu

Sample Information

Host: Harmonia axyridis

Isolation: -

Biosample Model: -

Collection Date: 2023-04-11

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR25457013

11.8 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 103

Chemoheterotrophy

Aerobic_Chemoheterotrophy 72

Aerobic_Chemoheterotrophy

Fermentation 27

Fermentation

Aromatic_Compound_Degradation 24

Aromatic_Compound_Degradation

Nitrate_Reduction 17

Nitrate_Reduction

Nitrate_Respiration 11

Nitrate_Respiration

Nitrogen_Respiration 11

Nitrogen_Respiration

Animal_Parasites_Or_Symbionts 10

Animal_Parasites_Or_Symbionts

Methanol_Oxidation 9

Methanol_Oxidation

Methylotrophy 9

Methylotrophy

Human_Associated 9

Human_Associated

Human_Pathogens_All 8

Human_Pathogens_All

Ureolysis 7

Ureolysis

Nitrate_Denitrification 5

Nitrate_Denitrification

Nitrite_Denitrification 5

Nitrite_Denitrification

Denitrification 5

Denitrification

Dark_Hydrogen_Oxidation 5

Dark_Hydrogen_Oxidation

Nitrite_Respiration 5

Nitrite_Respiration

Nitrogen_Fixation 3

Nitrogen_Fixation

Chitinolysis 2

Chitinolysis

Sulfate_Respiration 1

Sulfate_Respiration

Respiration_Of_Sulfur_Compounds 1

Respiration_Of_Sulfur_Compounds

Dark_Oxidation_Of_Sulfur_Compounds 1

Dark_Oxidation_Of_Sulfur_Compounds

Manganese_Oxidation 1

Manganese_Oxidation

Human_Pathogens_Nosocomia 1

Human_Pathogens_Nosocomia

Human_Gut 1

Human_Gut

Mammal_Gut 1

Mammal_Gut

Photosynthetic_Cyanobacteria 1

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 1

Oxygenic_Photoautotrophy

Photoautotrophy 1

Photoautotrophy

Phototrophy 1

Phototrophy

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