SRR25457012 - Harmonia axyridis

Basic Information

Run: SRR25457012

Assay Type: AMPLICON

Biosample: SAMN36759188

Bytes: 12668678

Center Name: GANSU AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA1000108

Geographic Information

Country: China

Continent: Asia

Location Name: China: Gansu

Sample Information

Host: Harmonia axyridis

Isolation: -

Biosample Model: -

Collection Date: 2023-04-12

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR25457012

12.1 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 104

Chemoheterotrophy

Aerobic_Chemoheterotrophy 81

Aerobic_Chemoheterotrophy

Aromatic_Compound_Degradation 22

Aromatic_Compound_Degradation

Fermentation 17

Fermentation

Nitrate_Reduction 16

Nitrate_Reduction

Methanol_Oxidation 10

Methanol_Oxidation

Methylotrophy 10

Methylotrophy

Ureolysis 9

Ureolysis

Nitrate_Respiration 7

Nitrate_Respiration

Nitrogen_Respiration 7

Nitrogen_Respiration

Nitrogen_Fixation 6

Nitrogen_Fixation

Human_Pathogens_All 6

Human_Pathogens_All

Human_Associated 6

Human_Associated

Animal_Parasites_Or_Symbionts 6

Animal_Parasites_Or_Symbionts

Phototrophy 5

Phototrophy

Photosynthetic_Cyanobacteria 4

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 4

Oxygenic_Photoautotrophy

Photoautotrophy 4

Photoautotrophy

Nitrate_Denitrification 3

Nitrate_Denitrification

Nitrite_Denitrification 3

Nitrite_Denitrification

Denitrification 3

Denitrification

Dark_Hydrogen_Oxidation 3

Dark_Hydrogen_Oxidation

Nitrite_Respiration 3

Nitrite_Respiration

Dark_Oxidation_Of_Sulfur_Compounds 2

Dark_Oxidation_Of_Sulfur_Compounds

Human_Pathogens_Nosocomia 1

Human_Pathogens_Nosocomia

Aliphatic_Non_Methane_Hydrocarbon_Degradation 1

Aliphatic_Non_Methane_Hydrocarbon_Degradation

Hydrocarbon_Degradation 1

Hydrocarbon_Degradation

Intracellular_Parasites 1

Intracellular_Parasites

Photoheterotrophy 1

Photoheterotrophy

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